Provided by: python3-ffcx_0.9.0-2_all bug

NAME

       fenicsformcompilerx - FEniCS Form Compiler X Documentation

       The   is   an   experimental   version   of   the   FEniCS   Form   Compiler.    It  is  developed  at  ‐
       https://github.com/FEniCS/ffcx.
                       ┌─────────────────────────────┬───────────────────────────────────────┐
                       │ ffcx                        │ FEniCS Form Compiler (FFCx).          │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.__main__               │ Run ffcx on a UFL file.               │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.analysis               │ Compiler stage 1: Analysis.           │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.compiler               │ Main  interface  for  compilation  of │
                       │                             │ forms.                                │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.element_interface      │ Finite element interface.             │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.formatting             │ Compiler stage 5: Code formatting.    │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.main                   │ Command-line interface to FFCx.       │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.naming                 │ Naming.                               │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.codegeneration         │ FFCx code generation.                 │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.options                │ Options.                              │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.ir.representation      │ Compiler      stage      2:      Code │
                       │                             │ representation.                       │
                       ├─────────────────────────────┼───────────────────────────────────────┤
                       │ ffcx.ir.representationutils │ Utility  functions  for   some   code │
                       │                             │ shared between representations.       │
                       └─────────────────────────────┴───────────────────────────────────────┘

FFCX

       FEniCS Form Compiler (FFCx).

       FFCx compiles finite element variational forms into C code.

       ffcx.get_options(priority_options: dict[str, dtype[Any] | None | type[Any] | _SupportsDType[dtype[Any]] |
       str | tuple[Any, int] | tuple[Any, SupportsIndex | Sequence[SupportsIndex]] | list[Any] | _DTypeDict |
       tuple[Any, Any] | int | float] | None = None) -> dict[str, int | float | dtype[Any] | None | type[Any] |
       _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any, SupportsIndex | Sequence[SupportsIndex]]
       | list[Any] | _DTypeDict | tuple[Any, Any]]
              Return (a copy of) the merged option values for FFCX.

              Parameters
                     priority_options – take priority over all other option values (see notes)

              Returns
                     merged option values

              NOTE:
                 This function sets the log level from the merged option values prior to returning.

                 The ffcx_options.json files are cached on the first call. Subsequent calls to this function use
                 this cache.

                 Priority ordering of options from highest to lowest is:

                 • priority_options (API and command line options)

                 • $PWD/ffcx_options.json (local options)

                 • $XDG_CONFIG_HOME/ffcx/ffcx_options.json (user options)

                 • FFCX_DEFAULT_OPTIONS in ffcx.options

                 XDG_CONFIG_HOME is ~/.config/ if the environment variable is not set.

                 Example ffcx_options.json file:
                     { “epsilon”: 1e-7 }

FFCX.__MAIN__

       Run ffcx on a UFL file.

       ffcx.__main__.main(args=None)
              Run ffcx on a UFL file.

FFCX.ANALYSIS

       Compiler stage 1: Analysis.

       This  module implements the analysis/preprocessing of variational forms, including automatic selection of
       elements, degrees and form representation type.

       Functions
                            ┌──────────────────────────────────┬────────────────────────┐
                            │ analyze_ufl_objects(ufl_objects, │ Analyze ufl object(s). │
                            │ scalar_type)                     │                        │
                            └──────────────────────────────────┴────────────────────────┘

       Classes
                                ┌───────────────────────────────────────┬───────────┐
                                │ UFLData(form_data,   unique_elements, │ UFL data. │
                                │ ...)                                  │           │
                                └───────────────────────────────────────┴───────────┘

       class ffcx.analysis.UFLData(form_data: tuple[ufl.algorithms.formdata.FormData, ...], unique_elements:
       list[basix.ufl._ElementBase], element_numbers: dict[basix.ufl._ElementBase, int],
       unique_coordinate_elements: list[basix.ufl._ElementBase], expressions: list[tuple[ufl.core.expr.Expr,
       npt.NDArray[np.float64], ufl.core.expr.Expr]])
              Bases: NamedTuple

              UFL data.

              Create     new     instance     of     UFLData(form_data,     unique_elements,    element_numbers,
              unique_coordinate_elements, expressions)

              element_numbers: dict[_ElementBase, int]
                     Alias for field number 2

              expressions: list[tuple[Expr, ndarray[Any, dtype[float64]], Expr]]
                     Alias for field number 4

              form_data: tuple[FormData, ...]
                     Alias for field number 0

              unique_coordinate_elements: list[_ElementBase]
                     Alias for field number 3

              unique_elements: list[_ElementBase]
                     Alias for field number 1

       ffcx.analysis.analyze_ufl_objects(ufl_objects: list[Form | AbstractFiniteElement | Mesh | tuple[Expr,
       ndarray[Any, dtype[floating]]]], scalar_type: dtype[Any] | None | type[Any] | _SupportsDType[dtype[Any]]
       | str | tuple[Any, int] | tuple[Any, SupportsIndex | Sequence[SupportsIndex]] | list[Any] | _DTypeDict |
       tuple[Any, Any]) -> UFLData
              Analyze ufl object(s).

              Parametersufl_objects – UFL objects

                     • scalar_type – Scalar type that should be used for the analysis

              Returns
                     form_datas: Form_data  objects  unique_elements:  Unique  elements  across  all  forms  and
                     expressions    element_numbers:    Mapping    to    unique   numbers   for   all   elements
                     unique_coordinate_elements: Unique coordinate elements across  all  forms  and  expressions
                     expressions: List of all expressions after post-processing, with its evaluation points
                        and the original expression

              Return type
                     A data structure holding

FFCX.COMPILER

       Main interface for compilation of forms.

       Breaks the compilation into several sequential stages.  The output of each stage is the input of the next
       stage.

   Compiler stages
       0.  Language, parsing

           • Input:  Python code or .ufl file

           • Output: UFL form

           This  stage consists of parsing and expressing a form in the UFL form language. This stage is handled
           by UFL.

       1.  Analysis

           • Input:  UFL form

           • Output: Preprocessed UFL form and FormData (metadata)

           This stage preprocesses the UFL form and extracts form metadata. It may also perform  simplifications
           on the form.

       2.  Code representation

           • Input:  Preprocessed UFL form and FormData (metadata)

           • Output: Intermediate Representation (IR)

           This  stage  examines  the  input  and  generates  all data needed for code generation. This includes
           generation of finite element basis functions, extraction of data for mapping of  degrees  of  freedom
           and  possible  precomputation  of integrals. Most of the complexity of compilation is handled in this
           stage.

           The IR is stored as a dictionary, mapping names of UFC functions to data needed for generation of the
           corresponding code.

       3.  Code generation

           • Input:  Intermediate Representation (IR)

           • Output: C code

           This stage examines the IR and generates the actual C code for the body of each UFC function.

           The code is stored as a dictionary, mapping names of UFC functions to strings containing the  C  code
           of the body of each function.

       4.  Code formatting

           • Input:  C code

           • Output: C code files

           This  stage examines the generated C++ code and formats it according to the UFC format, generating as
           output one or more .h/.c files conforming to the UFC format.

       Functions
                     ┌──────────────────────────────────┬───────────────────────────────────────┐
                     │ compile_ufl_objects(ufl_objects, │ Generate UFC code  for  a  given  UFL │
                     │ options[, ...])                  │ objects.                              │
                     └──────────────────────────────────┴───────────────────────────────────────┘

       ffcx.compiler.analyze_ufl_objects(ufl_objects: list[Form | AbstractFiniteElement | Mesh | tuple[Expr,
       ndarray[Any, dtype[floating]]]], scalar_type: dtype[Any] | None | type[Any] | _SupportsDType[dtype[Any]]
       | str | tuple[Any, int] | tuple[Any, SupportsIndex | Sequence[SupportsIndex]] | list[Any] | _DTypeDict |
       tuple[Any, Any]) -> UFLData
              Analyze ufl object(s).

              Parametersufl_objects – UFL objects

                     • scalar_type – Scalar type that should be used for the analysis

              Returns
                     form_datas:  Form_data  objects  unique_elements:  Unique  elements  across  all  forms and
                     expressions   element_numbers:   Mapping   to   unique    numbers    for    all    elements
                     unique_coordinate_elements:  Unique  coordinate  elements  across all forms and expressions
                     expressions: List of all expressions after post-processing, with its evaluation points
                        and the original expression

              Return type
                     A data structure holding

       ffcx.compiler.compile_ufl_objects(ufl_objects: list[Any], options: dict[str, int | float | dtype[Any] |
       None | type[Any] | _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any, SupportsIndex |
       Sequence[SupportsIndex]] | list[Any] | _DTypeDict | tuple[Any, Any]], object_names: dict[int, str] | None
       = None, prefix: str | None = None, visualise: bool = False) -> tuple[str, str]
              Generate UFC code for a given UFL objects.

              Parametersufl_objects – Objects to be compiled. Accepts elements, forms,  integrals  or  coordinate
                       mappings.

                     • object_names – Map from object Python id to object name

                     • prefix – Prefix

                     • options – Options

                     • visualise – Toggle visualisation

       ffcx.compiler.compute_ir(analysis: UFLData, object_names: dict[int, str], prefix: str, options: dict[str,
       dtype[Any] | None | type[Any] | _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any,
       SupportsIndex | Sequence[SupportsIndex]] | list[Any] | _DTypeDict | tuple[Any, Any] | int | float],
       visualise: bool) -> DataIR
              Compute intermediate representation.

       ffcx.compiler.format_code(code: CodeBlocks) -> tuple[str, str]
              Format given code in UFC format. Returns two strings with header and source file contents.

       ffcx.compiler.generate_code(ir: DataIR, options: dict[str, int | float | dtype[Any] | None | type[Any] |
       _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any, SupportsIndex | Sequence[SupportsIndex]]
       | list[Any] | _DTypeDict | tuple[Any, Any]]) -> CodeBlocks
              Generate code blocks from intermediate representation.

       ffcx.compiler.time() -> floating-point number
              Return  the  current time in seconds since the Epoch.  Fractions of a second may be present if the
              system clock provides them.

FFCX.ELEMENT_INTERFACE

       Finite element interface.

       Functions
                  ┌───────────────────────────────────────┬───────────────────────────────────────┐
                  │ basix_index(indices)                  │ Get the Basix index of a derivative.  │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ create_quadrature(cellname,   degree, │ Create a quadrature rule.             │
                  │ rule, ...)                            │                                       │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ map_facet_points(points,       facet, │ Map points from a reference facet  to │
                  │ cellname)                             │ a physical facet.                     │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ reference_cell_vertices(cellname)     │ Get the vertices of a reference cell. │
                  └───────────────────────────────────────┴───────────────────────────────────────┘

       ffcx.element_interface.basix_index(indices: tuple[int]) -> int
              Get the Basix index of a derivative.

       ffcx.element_interface.create_quadrature(cellname: str, degree: int, rule: str, elements:
       list[_ElementBase]) -> tuple[Buffer | _SupportsArray[dtype[Any]] |
       _NestedSequence[_SupportsArray[dtype[Any]]] | bool | int | float | complex | str | bytes |
       _NestedSequence[bool | int | float | complex | str | bytes], Buffer | _SupportsArray[dtype[Any]] |
       _NestedSequence[_SupportsArray[dtype[Any]]] | bool | int | float | complex | str | bytes |
       _NestedSequence[bool | int | float | complex | str | bytes]]
              Create a quadrature rule.

       ffcx.element_interface.map_facet_points(points: ndarray[Any, dtype[float64]], facet: int, cellname: str)
       -> ndarray[Any, dtype[float64]]
              Map points from a reference facet to a physical facet.

       ffcx.element_interface.reference_cell_vertices(cellname: str) -> ndarray[Any, dtype[float64]]
              Get the vertices of a reference cell.

FFCX.FORMATTING

       Compiler stage 5: Code formatting.

       This  module  implements the formatting of UFC code from a given dictionary of generated C++ code for the
       body of each UFC function.

       It relies on templates for UFC code available as part of the module ufcx_utils.

       Functions
                     ┌───────────────────────────────────────┬──────────────────────────────────┐
                     │ format_code(code)                     │ Format given code in UFC format. │
                     ├───────────────────────────────────────┼──────────────────────────────────┤
                     │ write_code(code_h,  code_c,   prefix, │ Write code to files.             │
                     │ output_dir)                           │                                  │
                     └───────────────────────────────────────┴──────────────────────────────────┘

       class ffcx.formatting.CodeBlocks(file_pre: list[tuple[str, str]], integrals: list[tuple[str, str]],
       forms: list[tuple[str, str]], expressions: list[tuple[str, str]], file_post: list[tuple[str, str]])
              Bases: NamedTuple

              Storage of code blocks of the form (declaration, implementation).

              Blocks for integrals, forms and expressions, and start and end of file output

              Create new instance of CodeBlocks(file_pre, integrals, forms, expressions, file_post)

              expressions: list[tuple[str, str]]
                     Alias for field number 3

              file_post: list[tuple[str, str]]
                     Alias for field number 4

              file_pre: list[tuple[str, str]]
                     Alias for field number 0

              forms: list[tuple[str, str]]
                     Alias for field number 2

              integrals: list[tuple[str, str]]
                     Alias for field number 1

       ffcx.formatting.format_code(code: CodeBlocks) -> tuple[str, str]
              Format given code in UFC format. Returns two strings with header and source file contents.

       ffcx.formatting.write_code(code_h, code_c, prefix, output_dir)
              Write code to files.

FFCX.MAIN

       Command-line interface to FFCx.

       Parse command-line arguments and generate code from input UFL form files.

       Functions
                                      ┌──────────────┬─────────────────────────┐
                                      │ main([args]) │ Run ffcx on a UFL file. │
                                      └──────────────┴─────────────────────────┘

       ffcx.main.arg_type
              alias of int

       ffcx.main.get_options(priority_options: dict[str, dtype[Any] | None | type[Any] |
       _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any, SupportsIndex | Sequence[SupportsIndex]]
       | list[Any] | _DTypeDict | tuple[Any, Any] | int | float] | None = None) -> dict[str, int | float |
       dtype[Any] | None | type[Any] | _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any,
       SupportsIndex | Sequence[SupportsIndex]] | list[Any] | _DTypeDict | tuple[Any, Any]]
              Return (a copy of) the merged option values for FFCX.

              Parameters
                     priority_options – take priority over all other option values (see notes)

              Returns
                     merged option values

              NOTE:
                 This function sets the log level from the merged option values prior to returning.

                 The ffcx_options.json files are cached on the first call. Subsequent calls to this function use
                 this cache.

                 Priority ordering of options from highest to lowest is:

                 • priority_options (API and command line options)

                 • $PWD/ffcx_options.json (local options)

                 • $XDG_CONFIG_HOME/ffcx/ffcx_options.json (user options)

                 • FFCX_DEFAULT_OPTIONS in ffcx.options

                 XDG_CONFIG_HOME is ~/.config/ if the environment variable is not set.

                 Example ffcx_options.json file:
                     { “epsilon”: 1e-7 }

       ffcx.main.main(args=None)
              Run ffcx on a UFL file.

FFCX.NAMING

       Naming.

       Functions
                       ┌───────────────────────────────────────┬─────────────────────────────┐
                       │ compute_signature(ufl_objects, tag)   │ Compute the signature hash. │
                       ├───────────────────────────────────────┼─────────────────────────────┤
                       │ expression_name(expression, prefix)   │ Get expression name.        │
                       ├───────────────────────────────────────┼─────────────────────────────┤
                       │ form_name(original_form,     form_id, │ Get form name.              │
                       │ prefix)                               │                             │
                       ├───────────────────────────────────────┼─────────────────────────────┤
                       │ integral_name(original_form,          │ Get integral name.          │
                       │ integral_type, ...)                   │                             │
                       └───────────────────────────────────────┴─────────────────────────────┘

       ffcx.naming.compute_signature(ufl_objects: list[Form | tuple[Expr, ndarray[Any, dtype[float64]]]], tag:
       str) -> str
              Compute the signature hash.

              Based on the UFL type of the objects and an additional optional ‘tag’.

       ffcx.naming.expression_name(expression: tuple[Expr, ndarray[Any, dtype[floating]]], prefix: str) -> str
              Get expression name.

       ffcx.naming.form_name(original_form: Form, form_id: int, prefix: str) -> str
              Get form name.

       ffcx.naming.integral_name(original_form: Form, integral_type: str, form_id: int, subdomain_id: tuple[int,
       ...] | tuple[str], prefix: str) -> str
              Get integral name.

FFCX.CODEGENERATION

       FFCx code generation.

       Functions
                            ┌────────────────────┬───────────────────────────────────────┐
                            │ get_include_path() │ Return location of UFCx header files. │
                            ├────────────────────┼───────────────────────────────────────┤
                            │ get_signature()    │ Return SHA-1 hash of the contents  of │
                            │                    │ ufcx.h.                               │
                            └────────────────────┴───────────────────────────────────────┘

       ffcx.codegeneration.get_include_path()
              Return location of UFCx header files.

       ffcx.codegeneration.get_signature()
              Return SHA-1 hash of the contents of ufcx.h.

              In this implementation, the value is computed on import.

FFCX.OPTIONS

       Options.

       Functions
                     ┌─────────────────────────────────┬───────────────────────────────────────┐
                     │ get_options([priority_options]) │ Return  (a copy of) the merged option │
                     │                                 │ values for FFCX.                      │
                     └─────────────────────────────────┴───────────────────────────────────────┘

       class ffcx.options.Path(*args, **kwargs)
              Bases: PurePath

              PurePath subclass that can make system calls.

              Path represents a filesystem path but unlike PurePath, also offers methods to do system  calls  on
              path  objects.  Depending on your system, instantiating a Path will return either a PosixPath or a
              WindowsPath object. You can also instantiate a  PosixPath  or  WindowsPath  directly,  but  cannot
              instantiate a WindowsPath on a POSIX system or vice versa.

              Construct  a  PurePath  from one or several strings and or existing PurePath objects.  The strings
              and path objects are combined so as to yield a canonicalized path, which is incorporated into  the
              new PurePath object.

              absolute()
                     Return  an  absolute  version  of this path by prepending the current working directory. No
                     normalization or symlink resolution is performed.

                     Use resolve() to get the canonical path to a file.

              chmod(mode, *, follow_symlinks=True)
                     Change the permissions of the path, like os.chmod().

              classmethod cwd()
                     Return a new path pointing to the current working directory.

              exists(*, follow_symlinks=True)
                     Whether this path exists.

                     This method normally follows symlinks; to check whether a symlink exists, add the  argument
                     follow_symlinks=False.

              expanduser()
                     Return a new path with expanded ~ and ~user constructs (as returned by os.path.expanduser)

              glob(pattern, *, case_sensitive=None)
                     Iterate over this subtree and yield all existing files (of any kind, including directories)
                     matching the given relative pattern.

              group()
                     Return the group name of the file gid.

              hardlink_to(target)
                     Make this path a hard link pointing to the same file as target.

                     Note the order of arguments (self, target) is the reverse of os.link’s.

              classmethod home()
                     Return   a   new   path   pointing   to   the   user’s   home  directory  (as  returned  by
                     os.path.expanduser(‘~’)).

              is_block_device()
                     Whether this path is a block device.

              is_char_device()
                     Whether this path is a character device.

              is_dir()
                     Whether this path is a directory.

              is_fifo()
                     Whether this path is a FIFO.

              is_file()
                     Whether this path is a regular file (also True for symlinks pointing to regular files).

              is_junction()
                     Whether this path is a junction.

              is_mount()
                     Check if this path is a mount point

              is_socket()
                     Whether this path is a socket.

              is_symlink()
                     Whether this path is a symbolic link.

              iterdir()
                     Yield path objects of the directory contents.

                     The children are yielded in arbitrary order, and the special entries ‘.’ and ‘..’  are  not
                     included.

              lchmod(mode)
                     Like  chmod(),  except  if  the  path  points  to  a symlink, the symlink’s permissions are
                     changed, rather than its target’s.

              lstat()
                     Like stat(), except if the path points to a symlink, the symlink’s  status  information  is
                     returned, rather than its target’s.

              mkdir(mode=511, parents=False, exist_ok=False)
                     Create a new directory at this given path.

              open(mode='r', buffering=-1, encoding=None, errors=None, newline=None)
                     Open  the  file  pointed  to  by this path and return a file object, as the built-in open()
                     function does.

              owner()
                     Return the login name of the file owner.

              read_bytes()
                     Open the file in bytes mode, read it, and close the file.

              read_text(encoding=None, errors=None)
                     Open the file in text mode, read it, and close the file.

              readlink()
                     Return the path to which the symbolic link points.

              rename(target)
                     Rename this path to the target path.

                     The target path may be absolute or relative. Relative paths are interpreted relative to the
                     current working directory, not the directory of the Path object.

                     Returns the new Path instance pointing to the target path.

              replace(target)
                     Rename this path to the target path, overwriting if that path exists.

                     The target path may be absolute or relative. Relative paths are interpreted relative to the
                     current working directory, not the directory of the Path object.

                     Returns the new Path instance pointing to the target path.

              resolve(strict=False)
                     Make the path absolute, resolving all symlinks on the way and also normalizing it.

              rglob(pattern, *, case_sensitive=None)
                     Recursively yield all existing files (of any  kind,  including  directories)  matching  the
                     given relative pattern, anywhere in this subtree.

              rmdir()
                     Remove this directory.  The directory must be empty.

              samefile(other_path)
                     Return   whether   other_path   is   the   same  or  not  as  this  file  (as  returned  by
                     os.path.samefile()).

              stat(*, follow_symlinks=True)
                     Return the result of the stat() system call on this path, like os.stat() does.

              symlink_to(target, target_is_directory=False)
                     Make this path a symlink pointing to the target path.  Note the order of  arguments  (link,
                     target) is the reverse of os.symlink.

              touch(mode=438, exist_ok=True)
                     Create this file with the given access mode, if it doesn’t exist.

              unlink(missing_ok=False)
                     Remove this file or link.  If the path is a directory, use rmdir() instead.

              walk(top_down=True, on_error=None, follow_symlinks=False)
                     Walk the directory tree from this directory, similar to os.walk().

              write_bytes(data)
                     Open the file in bytes mode, write to it, and close the file.

              write_text(data, encoding=None, errors=None, newline=None)
                     Open the file in text mode, write to it, and close the file.

       ffcx.options.get_options(priority_options: dict[str, dtype[Any] | None | type[Any] |
       _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any, SupportsIndex | Sequence[SupportsIndex]]
       | list[Any] | _DTypeDict | tuple[Any, Any] | int | float] | None = None) -> dict[str, int | float |
       dtype[Any] | None | type[Any] | _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any,
       SupportsIndex | Sequence[SupportsIndex]] | list[Any] | _DTypeDict | tuple[Any, Any]]
              Return (a copy of) the merged option values for FFCX.

              Parameters
                     priority_options – take priority over all other option values (see notes)

              Returns
                     merged option values

              NOTE:
                 This function sets the log level from the merged option values prior to returning.

                 The ffcx_options.json files are cached on the first call. Subsequent calls to this function use
                 this cache.

                 Priority ordering of options from highest to lowest is:

                 • priority_options (API and command line options)

                 • $PWD/ffcx_options.json (local options)

                 • $XDG_CONFIG_HOME/ffcx/ffcx_options.json (user options)

                 • FFCX_DEFAULT_OPTIONS in ffcx.options

                 XDG_CONFIG_HOME is ~/.config/ if the environment variable is not set.

                 Example ffcx_options.json file:
                     { “epsilon”: 1e-7 }

FFCX.IR.REPRESENTATION

       Compiler stage 2: Code representation.

       Module  computes intermediate representations of forms. For each UFC function, we extract the data needed
       for code generation at a later stage.

       The representation should conform strictly to the naming and order of functions in UFC.  Thus,  for  code
       generation  of  the  function  “foo”,  one  should  only  need to use the data stored in the intermediate
       representation under the key “foo”.

       Functions
                   ┌───────────────────────────────────────┬──────────────────────────────────────┐
                   │ compute_ir(analysis,    object_names, │ Compute intermediate representation. │
                   │ prefix, ...)                          │                                      │
                   └───────────────────────────────────────┴──────────────────────────────────────┘

       Classes
                  ┌───────────────────────────────────────┬───────────────────────────────────────┐
                  │ CommonExpressionIR(integral_type,     │ Common-ground   for   IntegralIR  and │
                  │ ...)                                  │ ExpressionIR.                         │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ DataIR(integrals, forms, expressions) │ Intermediate representation of data.  │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ ExpressionIR(expression, ...)         │ Intermediate  representation   of   a │
                  │                                       │ DOLFINx Expression.                   │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ FormIR(id,   name,  signature,  rank, │ Intermediate  representation   of   a │
                  │ ...)                                  │ form.                                 │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ IntegralIR(expression, rank, ...)     │ Intermediate   representation  of  an │
                  │                                       │ integral.                             │
                  ├───────────────────────────────────────┼───────────────────────────────────────┤
                  │ QuadratureIR(cell_shape,      points, │ Intermediate   representation   of  a │
                  │ weights)                              │ quadrature rule.                      │
                  └───────────────────────────────────────┴───────────────────────────────────────┘

       class ffcx.ir.representation.CommonExpressionIR(integral_type: str, entity_type: str, tensor_shape:
       list[int], coefficient_numbering: dict[ufl.Coefficient, int], coefficient_offsets: dict[ufl.Coefficient,
       int], original_constant_offsets: dict[ufl.Constant, int], unique_tables: dict[str,
       npt.NDArray[np.float64]], unique_table_types: dict[str, str], integrand: dict[QuadratureRule, dict],
       name: str, needs_facet_permutations: bool, shape: list[int])
              Bases: NamedTuple

              Common-ground for IntegralIR and ExpressionIR.

              Create   new   instance   of    CommonExpressionIR(integral_type,    entity_type,    tensor_shape,
              coefficient_numbering,      coefficient_offsets,     original_constant_offsets,     unique_tables,
              unique_table_types, integrand, name, needs_facet_permutations, shape)

              coefficient_numbering: dict[Coefficient, int]
                     Alias for field number 3

              coefficient_offsets: dict[Coefficient, int]
                     Alias for field number 4

              entity_type: str
                     Alias for field number 1

              integral_type: str
                     Alias for field number 0

              integrand: dict[QuadratureRule, dict]
                     Alias for field number 8

              name: str
                     Alias for field number 9

              needs_facet_permutations: bool
                     Alias for field number 10

              original_constant_offsets: dict[Constant, int]
                     Alias for field number 5

              shape: list[int]
                     Alias for field number 11

              tensor_shape: list[int]
                     Alias for field number 2

              unique_table_types: dict[str, str]
                     Alias for field number 7

              unique_tables: dict[str, ndarray[Any, dtype[float64]]]
                     Alias for field number 6

       class ffcx.ir.representation.DataIR(integrals: list[IntegralIR], forms: list[FormIR], expressions: list[‐
       ExpressionIR])
              Bases: NamedTuple

              Intermediate representation of data.

              Create new instance of DataIR(integrals, forms, expressions)

              expressions: list[ExpressionIR]
                     Alias for field number 2

              forms: list[FormIR]
                     Alias for field number 1

              integrals: list[IntegralIR]
                     Alias for field number 0

       class ffcx.ir.representation.ExpressionIR(expression: CommonExpressionIR, original_coefficient_positions:
       list[int], coefficient_names: list[str], constant_names: list[str], name_from_uflfile: str)
              Bases: NamedTuple

              Intermediate representation of a DOLFINx Expression.

              Create new instance of ExpressionIR(expression, original_coefficient_positions, coefficient_names,
              constant_names, name_from_uflfile)

              coefficient_names: list[str]
                     Alias for field number 2

              constant_names: list[str]
                     Alias for field number 3

              expression: CommonExpressionIR
                     Alias for field number 0

              name_from_uflfile: str
                     Alias for field number 4

              original_coefficient_positions: list[int]
                     Alias for field number 1

       class ffcx.ir.representation.FormIR(id: int, name: str, signature: str, rank: int, num_coefficients: int,
       num_constants: int, name_from_uflfile: str, original_coefficient_positions: list[int], coefficient_names:
       list[str], constant_names: list[str], finite_element_hashes: list[int], integral_names: dict[str,
       list[str]], subdomain_ids: dict[str, list[int]])
              Bases: NamedTuple

              Intermediate representation of a form.

              Create  new  instance  of  FormIR(id,  name,  signature,  rank,  num_coefficients,  num_constants,
              name_from_uflfile,      original_coefficient_positions,     coefficient_names,     constant_names,
              finite_element_hashes, integral_names, subdomain_ids)

              coefficient_names: list[str]
                     Alias for field number 8

              constant_names: list[str]
                     Alias for field number 9

              finite_element_hashes: list[int]
                     Alias for field number 10

              id: int
                     Alias for field number 0

              integral_names: dict[str, list[str]]
                     Alias for field number 11

              name: str
                     Alias for field number 1

              name_from_uflfile: str
                     Alias for field number 6

              num_coefficients: int
                     Alias for field number 4

              num_constants: int
                     Alias for field number 5

              original_coefficient_positions: list[int]
                     Alias for field number 7

              rank: int
                     Alias for field number 3

              signature: str
                     Alias for field number 2

              subdomain_ids: dict[str, list[int]]
                     Alias for field number 12

       class ffcx.ir.representation.Integral(integrand, integral_type, domain, subdomain_id, metadata,
       subdomain_data)
              Bases: object

              An integral over a single domain.

              Initialise.

              integral_type()
                     Return the domain type of this integral.

              integrand()
                     Return the integrand expression, which is an Expr instance.

              metadata()
                     Return the compiler metadata this integral has been annotated with.

              reconstruct(integrand=None, integral_type=None, domain=None, subdomain_id=None, metadata=None,
              subdomain_data=None)
                     Construct a new Integral object with some properties replaced with new values.

                     Example

                     <a  =  Integral  instance>   b   =   a.reconstruct(expand_compounds(a.integrand()))   c   =
                     a.reconstruct(metadata={‘quadrature_degree’:2})

              subdomain_data()
                     Return the domain data of this integral.

              subdomain_id()
                     Return the subdomain id of this integral.

              ufl_domain()
                     Return the integration domain of this integral.

       class ffcx.ir.representation.IntegralIR(expression: CommonExpressionIR, rank: int, enabled_coefficients:
       list[bool], coordinate_element_hash: str)
              Bases: NamedTuple

              Intermediate representation of an integral.

              Create new instance of IntegralIR(expression, rank, enabled_coefficients, coordinate_element_hash)

              coordinate_element_hash: str
                     Alias for field number 3

              enabled_coefficients: list[bool]
                     Alias for field number 2

              expression: CommonExpressionIR
                     Alias for field number 0

              rank: int
                     Alias for field number 1

       class ffcx.ir.representation.QuadratureIR(cell_shape: str, points: npt.NDArray[np.float64], weights:
       npt.NDArray[np.float64])
              Bases: NamedTuple

              Intermediate representation of a quadrature rule.

              Create new instance of QuadratureIR(cell_shape, points, weights)

              cell_shape: str
                     Alias for field number 0

              points: ndarray[Any, dtype[float64]]
                     Alias for field number 1

              weights: ndarray[Any, dtype[float64]]
                     Alias for field number 2

       class ffcx.ir.representation.QuadratureRule(points, weights, tensor_factors=None)
              Bases: object

              A quadrature rule.

              Initialise.

              id()   Return unique deterministic identifier.

                     NOTE:
                        This identifier is used to provide unique names to tables and symbols in generated code.

       class ffcx.ir.representation.UFLData(form_data: tuple[ufl.algorithms.formdata.FormData, ...],
       unique_elements: list[basix.ufl._ElementBase], element_numbers: dict[basix.ufl._ElementBase, int],
       unique_coordinate_elements: list[basix.ufl._ElementBase], expressions: list[tuple[ufl.core.expr.Expr,
       npt.NDArray[np.float64], ufl.core.expr.Expr]])
              Bases: NamedTuple

              UFL data.

              Create     new     instance     of     UFLData(form_data,     unique_elements,    element_numbers,
              unique_coordinate_elements, expressions)

              element_numbers: dict[_ElementBase, int]
                     Alias for field number 2

              expressions: list[tuple[Expr, ndarray[Any, dtype[float64]], Expr]]
                     Alias for field number 4

              form_data: tuple[FormData, ...]
                     Alias for field number 0

              unique_coordinate_elements: list[_ElementBase]
                     Alias for field number 3

              unique_elements: list[_ElementBase]
                     Alias for field number 1

       ffcx.ir.representation.compute_integral_ir(cell, integral_type, entity_type, integrands, argument_shape,
       p, visualise)
              Compute intermediate representation for an integral.

       ffcx.ir.representation.compute_ir(analysis: UFLData, object_names: dict[int, str], prefix: str, options:
       dict[str, dtype[Any] | None | type[Any] | _SupportsDType[dtype[Any]] | str | tuple[Any, int] | tuple[Any,
       SupportsIndex | Sequence[SupportsIndex]] | list[Any] | _DTypeDict | tuple[Any, Any] | int | float],
       visualise: bool) -> DataIR
              Compute intermediate representation.

       ffcx.ir.representation.create_quadrature_points_and_weights(integral_type, cell, degree, rule, elements,
       use_tensor_product=False)
              Create quadrature rule and return points and weights.

       ffcx.ir.representation.sorted_expr_sum(seq)
              Sorted expr sum.

FFCX.IR.REPRESENTATIONUTILS

       Utility functions for some code shared between representations.

       Functions
                ┌────────────────────────────────────────────┬───────────────────────────────────────┐
                │ create_quadrature_points_and_weights(...[, │ Create  quadrature  rule  and  return │
                │ ...])                                      │ points and weights.                   │
                ├────────────────────────────────────────────┼───────────────────────────────────────┤
                │ integral_type_to_entity_dim(integral_type, │ Given  integral_type and domain tdim, │
                │ tdim)                                      │ return the tdim  of  the  integration │
                │                                            │ entity.                               │
                ├────────────────────────────────────────────┼───────────────────────────────────────┤
                │ map_integral_points(points, integral_type, │ Map  points  from reference entity to │
                │ ...)                                       │ its parent reference cell.            │
                └────────────────────────────────────────────┴───────────────────────────────────────┘

       Classes
                            ┌───────────────────────────────────────┬────────────────────┐
                            │ QuadratureRule(points,      weights[, │ A quadrature rule. │
                            │ tensor_factors])                      │                    │
                            └───────────────────────────────────────┴────────────────────┘

       class ffcx.ir.representationutils.QuadratureRule(points, weights, tensor_factors=None)
              Bases: object

              A quadrature rule.

              Initialise.

              id()   Return unique deterministic identifier.

                     NOTE:
                        This identifier is used to provide unique names to tables and symbols in generated code.

       ffcx.ir.representationutils.create_quadrature(cellname: str, degree: int, rule: str, elements:
       list[_ElementBase]) -> tuple[Buffer | _SupportsArray[dtype[Any]] |
       _NestedSequence[_SupportsArray[dtype[Any]]] | bool | int | float | complex | str | bytes |
       _NestedSequence[bool | int | float | complex | str | bytes], Buffer | _SupportsArray[dtype[Any]] |
       _NestedSequence[_SupportsArray[dtype[Any]]] | bool | int | float | complex | str | bytes |
       _NestedSequence[bool | int | float | complex | str | bytes]]
              Create a quadrature rule.

       ffcx.ir.representationutils.create_quadrature_points_and_weights(integral_type, cell, degree, rule,
       elements, use_tensor_product=False)
              Create quadrature rule and return points and weights.

       ffcx.ir.representationutils.integral_type_to_entity_dim(integral_type, tdim)
              Given integral_type and domain tdim, return the tdim of the integration entity.

       ffcx.ir.representationutils.map_facet_points(points: ndarray[Any, dtype[float64]], facet: int, cellname:
       str) -> ndarray[Any, dtype[float64]]
              Map points from a reference facet to a physical facet.

       ffcx.ir.representationutils.map_integral_points(points, integral_type, cell, entity)
              Map points from reference entity to its parent reference cell.

       ffcx.ir.representationutils.reference_cell_vertices(cellname: str) -> ndarray[Any, dtype[float64]]
              Get the vertices of a reference cell.

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AUTHOR

       FEniCS Project

COPYRIGHT

       2024, FEniCS Project

0.9.0                                             Nov 05, 2024                            FENICSFORMCOMPILERX(1)