NAME

       Bio::Graphics::Browser2::PluginSet -- A set of plugins

SYNOPSIS

       None.  Used internally by gbrowse & gbrowse_img.

METHODS

       $plugin_set = Bio::Graphics::Browser2::PluginSet->new($config,$page_settings,@search_path)
           Initialize plugins according to the configuration, page settings and the plugin search path.  Returns
           an object.

       $plugin_set->configure($database)
           Configure the plugins given the database.

       $plugin_set->annotate($segment,$feature_files,$rel2abs)
           Run  plugin  annotations  on  the  $segment,  adding  the  resulting feature files to the hash ref in
           $feature_files ({track_name=>$feature_list}).   The  $rel2abs  argument  holds  a  coordinate  mapper
           callback, but is currently unused.

SEE ALSO

       Bio::Graphics::Browser2

AUTHOR

       Lincoln Stein <lstein@cshl.org>.

       Copyright (c) 2005 Cold Spring Harbor Laboratory

       This  library  is  free  software;  you can redistribute it and/or modify it under the same terms as Perl
       itself.  See DISCLAIMER.txt for disclaimers of warranty.

perl v5.40.0                                       2024-10-20             Bio::Graphics::...ser2::PluginSet(3pm)