Provided by: libvcflib-tools_1.0.12+dfsg-1_amd64 bug

NAME
       vcfsamplediff


SYNOPSIS
       vcfsamplediff options [ ...  ]


DESCRIPTION
       Establish  putative  somatic  variants  using  reported differences between germline and somatic samples.
       Tags each record where the listed sample genotypes differ with .  The  first  sample  is  assumed  to  be
       germline,  the second somatic.  Each record is tagged with ={germline,somatic,loh} to specify the type of
       variant given the genotype difference between the two samples.


OPTIONS
              options:
                  -s --strict     Require that no observations in the germline support the somatic alternate.

              Type: transformation


EXIT VALUES
       0      Success

       not 0  Failure


SEE ALSO
       vcflib(1)


OTHER
LICENSE
       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.


AUTHORS
       Erik Garrison and vcflib contributors.

vcfsamplediff (vcflib)                                                                          VCFSAMPLEDIFF(1)