NAME

       kraken-mpa-report - assigning taxonomic labels to short DNA sequences

SYNOPSIS

       kraken-mpa-report [--db KRAKEN_DB_NAME] [options] <kraken output file(s)>

OPTIONS

       --db NAME
              Name of Kraken database (default: none)

       --show-zeros
              Display taxa even if they lack a read in any sample

       --header-line
              Display a header line indicating sample IDs (sample IDs are the filenames)

       --intermediate-ranks
              Display taxa not at the standard ranks with x__ prefix

kraken-mpa-report 0.10.5~beta                    September 2015                             KRAKEN-MPA-REPORT(1)