NAME

       saint-spc-noctrl  -  run  SAINT  scoring  algorithm for protein-protein interaction data using label free
       quantitative proteomics data

SYNOPSIS

       saint-spc-noctrl [interactionFile]  [preyFile]  [baitFile]  [nburnin]  [niter]  [fthres]  [fgroup]  [var]
       [normalize]

DESCRIPTION

       -burnin and iter: burn-in period and main iteration of MCMC

       -fthres: frequency threshold above which probability is set to 0

       -fgroup: frequency boundary dividing high and low frequency groups

       -var: binary [0/1] indicator for modeling variance of the count data distributions

       -normalize: whether to normalize the counts by total spectral counts

SEE ALSO

       You can download a PDF file with more detailed instructions from

              http://sourceforge.net/projects/saint-apms/files/

       which is called saint-vignette-<YYYYMonDD>.pdf.

saint-spc-noctrl                                   April 2012                                SAINT-SPC-NOCTRL(1)