NAME

       rnr-prune - prunes a list of taxa from a bootstrap tree or a single tree with branch lengths

DESCRIPTION

       This is RnR-prune version 1.0 released by Andre J. Aberer in 2011-10-25.

       This  program prunes a list of taxa from a bootstrap tree or a single tree with branch lengths (such as a
       best-known ML/MP-tree).

       SYNTAX: rnr-prune [-i <bootTrees> | -t <treeFile>] -x <excludeFile> -n <runId> [-w <workingDir>] [-h]

              OBLIGATORY:

       -x <excludeFile>

              A list of taxa (one taxon per line) to prune  from  either  the  bootstrap  trees  or  the  single
              best-known tree.

       -i <bootTrees>

              A collection of bootstrap trees.

       -t <treeFile>

              A single tree with branch lengths. Use either this flag or the -i flag.

       -n <runId>

              An identifier for this run.

              OPTIONAL:

       -w <workDir>

              A working directory where output files are created.

       -h

              This help file.

AUTHOR

       This  manpage was written by Nilesh Patra for the Debian distribution and can be used for any other usage
       of the program.

rnr-prune 1.0.1                                   October 2021                                      RNR-PRUNE(1)