Provided by: phyx_1.3.1+ds-2build1_amd64 bug

NAME
       pxcolt - collapse edges with support below some threshold


SYNOPSIS
       pxcolt [OPTIONS]...


DESCRIPTION
       Collapse edges with support below some threshold.  If annotated Nexus, may require passing in the support
       identifier  (-s).   This  will  take  a  newick- or nexus-formatted tree from a file or STDIN.  Output is
       written in newick format.


OPTIONS
       -t, --treef=FILE
              input tree file, STDIN otherwise

       -l, --limit=DOUBLE
              minimum support threshold as proportion (default = 0.5)

       -o, --outf=FILE
              output file, STOUT otherwise

       -h, --help
              display this help and exit

       -V, --version
              display version and exit

       -C, --citation
              display phyx citation and exit


CITATION
       Brown, Joseph W., Joseph F. Walker, and Stephen A.  Smith.  2017.  Phyx:  phylogenetic  tools  for  unix.
       Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.


AUTHOR
       Written by Joseph W. Brown


REPORTING BUGS
       Report      bugs      to:      <https://github.com/FePhyFoFum/phyx/issues>      phyx      home      page:
       <https://github.com/FePhyFoFum/phyx>


COPYRIGHT
       Copyright © 2018-2021 FePhyFoFum License GPLv3

pxcolt 1.3                                          July 2023                                          PXCOLT(1)