NAME

       gt-bed_to_gff3 - Parse BED file and convert it to GFF3.

SYNOPSIS

       gt bed_to_gff3 [BED_file]

DESCRIPTION

       -featuretype [string]
           Set type of parsed BED features (default: BED_feature)

       -thicktype [string]
           Set type of parsed thick BED features (default: BED_thick_feature)

       -blocktype [string]
           Set type of parsed BED blocks (default: BED_block)

       -o [filename]
           redirect output to specified file (default: undefined)

       -gzip [yes|no]
           write gzip compressed output file (default: no)

       -bzip2 [yes|no]
           write bzip2 compressed output file (default: no)

       -force [yes|no]
           force writing to output file (default: no)

       -help
           display help and exit

       -version
           display version information and exit

REPORTING BUGS

       Report bugs to https://github.com/genometools/genometools/issues.

GenomeTools 1.6.5                                  03/31/2024                                  GT-BED_TO_GFF3(1)