NAME

       gsort - sort genomic data

SYNOPSIS

       gsort [--chromosomemappings CHROMOSOMEMAPPINGS] [--memory MEMORY] [--parent] PATH GENOME

DESCRIPTION

   Positional arguments:
       PATH   a tab-delimited file to sort

       GENOME a genome file of chromosome sizes and order

OPTIONS

       --chromosomemappings CHROMOSOMEMAPPINGS, -c CHROMOSOMEMAPPINGS
              a file used to re-map chromosome names for example from hg19 to GRCh37

       --memory MEMORY, -m MEMORY
              megabytes of memory to use before writing to temp files. [default: 2800]

       --parent, -p
              for gff only. given rows with same chrom and start put those with a 'Parent' attribute first

       --help, -h
              display this help and exit

AUTHOR

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.

gsort 0.1.4                                       November 2020                                         GSORT(1)