NAME

       biom - Biological Observation Matrix (BIOM) format (Python 3)

SYNOPSIS

       biom [OPTIONS] COMMAND [ARGS]...

OPTIONS

       --version
              Show the version and exit.

       -h, --help
              Show this message and exit.

   Commands:
       add-metadata
              Add metadata to a BIOM table.

       convert
              Convert to/from the BIOM table format.

       export-metadata
              Export metadata as TSV.

       from-uc
              Create a BIOM table from a vsearch/uclust/usearch BIOM...

       head   Dump the first bit of a table.

       normalize-table
              Normalize a BIOM table.

       show-install-info
              Provide information about the biom-format installation.

       subset-table
              Subset a BIOM table.

       summarize-table
              Summarize sample or observation data in a BIOM table.

       table-ids
              Dump IDs in a table.

       validate-table
              Validate a BIOM-formatted file.

AUTHOR

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.

biom 2.1.8                                          July 2020                                            BIOM(1)