NAME

       daligner - local alignment discovery between long nucleotide sequencing reads

SYNOPSIS

       daligner [options] files...

DESCRIPTION

       These  tools  permit  one  to  find  all  significant local alignments between reads encoded in a Dazzler
       database.  The assumption is that the reads are from a Pacific Biosciences RS  II  long  read  sequencer.
       That is, the reads are long and noisy, up to 15% on average.

OPTIONS

       For a complete description of available commands and their options, see /usr/share/doc/daligner/README.md

                                                  October 2016                                       DALIGNER(1)