NAME

       fps2sga.pl - convert fps to sga

DESCRIPTION

              fps2sga.pl [options] <FPS file>

              where options are:

       -h|--help
              Show this stuff

       -f|--feature <feature>
              Set Feature name <feature>

       -s|--species <species>
              Assembly <species> (i.e hg18)

       -x     Generate an extended SGA file with the 6th field equal to the FPS 'description' field

       --ignore0flag
              Ignore 0 flag at position 29 of the FP line, so keep orientation the same as original

AUTHOR

        This manpage was written by Andreas Tille for the Debian distribution and
        can be used for any other usage of the program.

fps2sga.pl 1.5.5                                   March 2020                                      FPS2SGA.PL(1)