NAME

       edamisformat - Find EDAM ontology terms by is_format_of relation

SYNOPSIS

       edamisformat -identifier string [-namespace list] -sensitive boolean -subclasses boolean
                    -obsolete boolean -edamisformat outobo

       edamisformat -help

DESCRIPTION

       edamisformat is a command line program from EMBOSS (“the European Molecular Biology Open Software
       Suite”). It is part of the "Ontology:EDAM,Data retrieval:Ontology data" command group(s).

OPTIONS

   Input section
       -identifier string

   Additional section
       -namespace list
           By default all terms are returned. Searches can be limited to one or a few namespaces. Default value:
           *

   Advanced section
       -sensitive boolean
           By default, the query keywords are matched against the EDAM term names (and synonyms) only. This
           option also matches the keywords against the EDAM term definitions and will therefore (typically)
           report more matches. Default value: N

       -subclasses boolean
           Extend the query matches to include all terms which are specialisations (EDAM sub-classes) of the
           matched type. Default value: N

       -obsolete boolean
           The default behaviour is to not use or return obsolete terms. This option if set will include all
           terms. Default value: N

   Output section
       -edamisformat outobo

BUGS

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

       edamisformat is fully documented via the tfm(1) system.

AUTHOR

       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
       redistributed under the same terms as EMBOSS itself.

EMBOSS 6.4.0                                       05/11/2012                                   EDAMISFORMAT(1e)